# Edit this line to be your xplor data processing directory # cd /usr/people/tutor##/exercise2 # # Copy your model into the starting 'standard' file # cp model.pdb positional.pdb # printf ' ********************************************************** \n' printf ' Individual B refinement 1.9 A\n' printf ' Input: positional.pdb xplor.fob generate.psf cell.inp \n' printf ' Output: brefinement.pdb \n' printf ' ********************************************************** \n' /eniac/usr/local/xplor3851/object_library/xploron3851_sgi_R8000.exe < /usr2/tutorials/exercise2/bref-19.inp |tee 21.brefinement.log # printf ' ********************************************************** \n' printf ' Positional 8 - 1.9 A \n' printf ' Input: brefinement.pdb xplor.fob generate.psf cell.inp \n' printf ' Output: positional.pdb \n' printf ' ********************************************************** \n' /eniac/usr/local/xplor3851/object_library/xploron3851_sgi_R8000.exe < /usr2/tutorials/exercise2/posit-19.inp |tee 22.positional.log # printf ' ********************************************************** \n' printf ' DONE: \n' printf ' ********************************************************** \n' # grep 'R=' 2[0-9].*.log | awk '{ printf" %s \tR-factor= %6.1f \n",$1,100*$7}'